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java.lang.Objectgov.nih.nlm.umls.io.RichMRFilesConceptInputStream
gov.nih.nlm.mms.cxt.MRCXTBuilderOutputStream
Builds MRCXT.RRF from MRHIER.RRF and MRCONSO.RRF with the help of a few indexes.
Field Summary |
Fields inherited from class gov.nih.nlm.umls.io.RichMRFilesConceptInputStream |
add_suffix, atom_hm, file_names, from_rsab, from_vsab, install_paths, mrcoc_source, mrconso_counter, mrconso_lines, mrconso_source, mrcxt_source, mrdef_source, mrdoc_source, mrhier_source, mrhist_source, mrmap_source, mrrel_source, mrsat_source, mrsty_source, rel_hm, this_concept, to_rsab, to_vsab, tokens |
Constructor Summary | |
MRCXTBuilderOutputStream()
Instantiates an empty MRCXTBuilderOutputStream . |
Method Summary | |
boolean |
isCancelled()
Indicates whether or not the license agreement was cancelled or not accepted. |
protected void |
openMRFiles()
Opens the Rich Release Format MR files. |
void |
sortMRCXT(MRCXTBuilderGUI gui)
Sorts the MRCXT.RRF file. |
int |
writeMRCXT(MRCXTBuilderGUI gui)
Writes MRCXT.RRF |
Methods inherited from class gov.nih.nlm.umls.io.RichMRFilesConceptInputStream |
close, getAtoms, getAttributes, getComponentHistories, getConceptProgress, getContexts, getCoocurrences, getDefinitions, getLineCounts, getMappings, getRelationships, getSemanticTypes, newInstanceFromMRCONSO, newInstanceFromMRHIER, open, openSourceFile, readConcept, setAdditionalSuffix |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
public MRCXTBuilderOutputStream()
MRCXTBuilderOutputStream
.
Method Detail |
public int writeMRCXT(MRCXTBuilderGUI gui) throws Exception
gui
- the MRCXTBuilderGUI
Exception
- if anything goes wrongpublic void sortMRCXT(MRCXTBuilderGUI gui) throws Exception
gui
- MRCXTBuilderGUI
Exception
public boolean isCancelled()
true
if the GUI was cancelled, false
otherwiseprotected void openMRFiles() throws IOException
openMRFiles
in class RichMRFilesConceptInputStream
IOException
- if any files cannot be opened
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