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Represents a mapping between two UMLS Concept
identifiers. Generally the first identifier is a concept that no
longer exists in the Metathesaurus and is being mapped to a Concept
in the current version (and current subset).
Following is a UML Class diagram showing the neighborhood around ConceptMapping
All data in a row of the MRCUI
file is represented here.
Method Summary | |
AdditionalRelationshipLabel |
getAdditionalRelationshipLabel()
Returns the AdditionalRelationshipLabel (RELA). |
String |
getConceptIdentifier()
Returns the concept identifier for the first concept (CUI1). |
String |
getCui1()
Returns the concept identifier for the first concept (CUI1). |
String |
getCui2()
Returns the concept identifier for the second concept (CUI2). |
String |
getKeyFields()
Returns a String key which can be used
by equals, compareTo, and hashCode methods. |
String |
getLastReleaseVersion()
Returns the last release version in which the CUI1 was valid (VER). |
String |
getMapin()
Returns the "in current subset" value (MAPIN). |
String |
getMapReason()
Returns the reason for this ConceptMapping (MAPREASON). |
String |
getReason()
Return the reason for this ConceptMapping . |
RelationshipLabel |
getRel()
Returns the relationship between the two CUIs (REL). |
AdditionalRelationshipLabel |
getRela()
Returns the AdditionalRelationshipLabel (RELA). |
RelationshipLabel |
getRelationship()
Returns the relationship between the two CUIs (REL). |
String |
getRelativeConceptIdentifier()
Returns the concept identifier for the second concept (CUI2). |
String |
getVer()
Returns the last release version in which the CUI1 was valid (VER). |
boolean |
inCurrentSubset()
Indicates whether or not this ConceptMapping is in the current subset (MAPIN). |
void |
setAdditionalRelationshipLabel(AdditionalRelationshipLabel rela)
Sets the AdditionalRelationshipLabel (RELA). |
void |
setConceptIdentifier(String cui1)
Sets concept identifier for the first concept (CUI1). |
void |
setCui1(String cui1)
Sets concept identifier for the first concept (CUI1). |
void |
setCui2(String cui2)
Sets the concept identifier for the second concept (CUI2). |
void |
setInCurrentSubset(boolean mapin)
Sets the flag indicating whether or not this ConceptMapping is in the current subset (MAPIN). |
void |
setLastReleaseVersion(String ver)
Sets the last release version in which the CUI1 was valid (VER). |
void |
setMapin(String mapin)
Sets the "in current subset" value (MAPIN). |
void |
setMapReason(String reason)
Sets the reason for this ConceptMapping (MAPREASON). |
void |
setReason(String reason)
Set the reason for this ConceptMapping . |
void |
setRel(RelationshipLabel rel)
Sets the relationship between the two CUIs (REL). |
void |
setRela(AdditionalRelationshipLabel rela)
Sets the AdditionalRelationshipLabel (RELA). |
void |
setRelationship(RelationshipLabel rel)
Sets the relationship between the two CUIs (REL). |
void |
setRelativeConceptIdentifier(String cui2)
Sets the concept identifier for the second concept (CUI2). |
void |
setVer(String ver)
Sets the last release version in which the CUI1 was valid (VER). |
Methods inherited from interface java.lang.Comparable |
compareTo |
Method Detail |
public String getCui1()
getConceptIdentifier()
.
public String getConceptIdentifier()
public void setCui1(String cui1)
setConceptIdentifier(String)
.
cui1
- the concept identifier for the first conceptpublic void setConceptIdentifier(String cui1)
cui1
- the concept identifier for the first conceptpublic String getLastReleaseVersion()
public String getVer()
getLastReleaseVersion()
.
public void setLastReleaseVersion(String ver)
ver
- the last release version in which the CUI1 was validpublic void setVer(String ver)
ver
- the last release version in which the CUI1 was validpublic RelationshipLabel getRelationship()
public RelationshipLabel getRel()
getRelationship()
.
public void setRelationship(RelationshipLabel rel)
rel
- the relationship between the two CUIspublic void setRel(RelationshipLabel rel)
setRelationship(RelationshipLabel)
rel
- the relationship between the two CUIspublic AdditionalRelationshipLabel getAdditionalRelationshipLabel()
AdditionalRelationshipLabel
(RELA).
AdditionalRelationshipLabel
public AdditionalRelationshipLabel getRela()
AdditionalRelationshipLabel
(RELA).
This method is shorthand for getAdditionalRelationshipLabel()
.
AdditionalRelationshipLabel
public void setAdditionalRelationshipLabel(AdditionalRelationshipLabel rela)
AdditionalRelationshipLabel
(RELA).
rela
- then AdditionalRelationshipLabel
public void setRela(AdditionalRelationshipLabel rela)
AdditionalRelationshipLabel
(RELA).
This method is shorthand for setAdditionalRelationshipLabel(AdditionalRelationshipLabel)
.
rela
- then AdditionalRelationshipLabel
public String getCui2()
getRelativeConceptIdentifier()
.
public void setCui2(String cui2)
setRelativeConceptIdentifier(String)
.
cui2
- the concept identifier for the second conceptpublic String getRelativeConceptIdentifier()
public void setRelativeConceptIdentifier(String cui2)
cui2
- the concept identifier for the second conceptpublic String getMapin()
public boolean inCurrentSubset()
ConceptMapping
is in the current subset (MAPIN).
boolean
true if in current subset,
boolean
false if not in current subsetpublic void setMapin(String mapin)
mapin
- the "in current subset" valuepublic void setInCurrentSubset(boolean mapin)
ConceptMapping
is in the current subset (MAPIN).
mapin
- boolean
true if in current subset,
boolean
false if not in current subsetpublic String getMapReason()
ConceptMapping
(MAPREASON).
ConceptMapping
public void setMapReason(String reason)
ConceptMapping
(MAPREASON).
reason
- the reason for this ConceptMapping
public String getReason()
ConceptMapping
.
public void setReason(String reason)
ConceptMapping
.
reason
- reason for the mappingpublic String getKeyFields()
String
key which can be used
by equals, compareTo, and hashCode methods.
String
composed from key ConceptMapping
fields
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